Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5067 domain-containing protein | CUU80_00625 | Not Available | Positive | 157390 - 158220 | 29315.7 |
| hypothetical protein | CUU80_00630 | Not Available | Positive | 158397 - 159293 | 32635.2 |
| eama/rhat family transporter | CUU80_00635 | Not Available | Positive | 159452 - 160411 | 34018.1 |
| (p)ppgpp synthetase | CUU80_00640 | Not Available | Negative | 160527 - 161267 | 28328.7 |
| 5,10-methylene tetrahydromethanopterin reductase | CUU80_00645 | Not Available | Positive | 161394 - 162806 | 51913.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | CUU80_00650 | Not Available | Positive | 162885 - 164327 | 52989.3 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CUU80_00655 | Not Available | Positive | 164357 - 165349 | 36676.7 |
| cell filamentation protein fic | CUU80_00660 | Not Available | Negative | 165387 - 166199 | 29539.7 |
| cell division protein ftsk | CUU80_00665 | Not Available | Positive | 166320 - 169322 | 104885.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | CUU80_00670 | Not Available | Positive | 169401 - 170084 | 24977.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


