Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4186 domain-containing protein | CUU80_09680 | Not Available | Negative | 2394577 - 2394981 | 15473.3 |
| dna polymerase iii subunit alpha | CUU80_09685 | Not Available | Negative | 2395034 - 2398588 | 130812.0 |
| transcription termination/antitermination factor nusg | CUU80_09690 | Not Available | Negative | 2398904 - 2399785 | 31719.8 |
| preprotein translocase subunit sece | CUU80_09695 | Not Available | Negative | 2399815 - 2400042 | 8419.77 |
| Trna-trp | Not Available | Not Available | Positive | 2400081 - 2400156 | Not Available |
| pyridoxal phosphate-dependent aminotransferase | CUU80_09705 | Not Available | Negative | 2400540 - 2401748 | 43040.0 |
| glutamate 5-kinase | CUU80_09710 | Not Available | Negative | 2401819 - 2402952 | 39034.9 |
| gtpase obge | CUU80_09715 | Not Available | Negative | 2402955 - 2404646 | 61139.3 |
| 50s ribosomal protein l27 | CUU80_09720 | Not Available | Negative | 2404724 - 2404975 | 8888.66 |
| 50s ribosomal protein l21 | CUU80_09725 | Not Available | Negative | 2404998 - 2405306 | 10934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


