Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system yafq family toxin | CUU80_09580 | Not Available | Positive | 2365472 - 2365825 | 13390.2 |
| duf4244 domain-containing protein | CUU80_09585 | Not Available | Positive | 2366186 - 2366473 | 10014.5 |
| pilus assembly protein tade | CUU80_09590 | Not Available | Positive | 2366478 - 2366897 | 13893.7 |
| pilus assembly protein tade | CUU80_09595 | Not Available | Positive | 2366923 - 2367291 | 12853.5 |
| sam-dependent methyltransferase | CUU80_09600 | Not Available | Positive | 2367390 - 2368961 | 57409.6 |
| hypothetical protein | CUU80_09605 | Not Available | Positive | 2368964 - 2369893 | 34225.5 |
| diacylglycerol kinase | CUU80_09610 | Not Available | Positive | 2370048 - 2371301 | 44672.7 |
| tetr/acrr family transcriptional regulator | CUU80_09615 | Not Available | Negative | 2371289 - 2371897 | 22727.1 |
| dna polymerase iii subunit gamma/tau | CUU80_09620 | Not Available | Positive | 2372134 - 2375061 | 101023.0 |
| recombination protein recr | CUU80_09625 | Not Available | Positive | 2375114 - 2375725 | 21880.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


