Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3710 domain-containing protein | CUU80_00575 | Not Available | Positive | 142794 - 143651 | 30903.2 |
| duf3159 domain-containing protein | CUU80_00580 | Not Available | Positive | 143655 - 144380 | 26746.0 |
| rna methyltransferase | CUU80_00585 | Not Available | Positive | 144404 - 145669 | 46237.3 |
| hypothetical protein | CUU80_00590 | Not Available | Positive | 145777 - 146376 | 20776.4 |
| haloacid dehalogenase | CUU80_00595 | Not Available | Positive | 146519 - 149014 | 88594.1 |
| aconitate hydratase acna | CUU80_00600 | Not Available | Positive | 149217 - 151916 | 97532.5 |
| gnat family n-acetyltransferase | CUU80_00605 | Not Available | Negative | 152062 - 152712 | 24822.8 |
| hypothetical protein | CUU80_00610 | Not Available | Positive | 152865 - 154970 | 79520.4 |
| dna-binding response regulator | CUU80_00615 | Not Available | Negative | 155072 - 155740 | 24444.4 |
| sensor histidine kinase | CUU80_00620 | Not Available | Negative | 155847 - 157067 | 43446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


