Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family peptidase | CUU80_09095 | Not Available | Positive | 2226033 - 2226791 | 27970.9 |
| gntr family transcriptional regulator | CUU80_09100 | Not Available | Negative | 2227103 - 2227855 | 26754.6 |
| gluconate transporter | CUU80_09105 | Not Available | Positive | 2228026 - 2229450 | 48774.7 |
| gluconate kinase | CUU80_09110 | Not Available | Positive | 2229598 - 2230074 | 17520.8 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | CUU80_09115 | Not Available | Positive | 2230119 - 2231012 | 31646.7 |
| dna starvation/stationary phase protection protein | CUU80_09120 | Not Available | Negative | 2231503 - 2231982 | 17809.0 |
| hypothetical protein | CUU80_09125 | Not Available | Negative | 2232088 - 2233419 | 48285.1 |
| abc transporter | CUU80_09130 | Not Available | Negative | 2233681 - 2236068 | 84353.1 |
| carbonate dehydratase | CUU80_09145 | Not Available | Negative | 2236641 - 2237324 | 24985.4 |
| peroxiredoxin | CUU80_09150 | Not Available | Positive | 2237591 - 2238154 | 21317.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


