Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_00525 | Not Available | Positive | 129913 - 130170 | 9440.34 |
| abc transporter permease | CUU80_00530 | Not Available | Negative | 130194 - 133100 | 101091.0 |
| abc transporter atp-binding protein | CUU80_00535 | Not Available | Negative | 133097 - 134029 | 33794.6 |
| hypothetical protein | CUU80_00540 | Not Available | Negative | 134035 - 134220 | 6876.59 |
| tyrosine recombinase | CUU80_00545 | Not Available | Positive | 134219 - 135202 | 36169.2 |
| abc transporter substrate-binding protein | CUU80_00550 | Not Available | Positive | 135608 - 137251 | 59288.6 |
| abc transporter permease | CUU80_00555 | Not Available | Positive | 137545 - 138471 | 33944.7 |
| peptide abc transporter permease | CUU80_00560 | Not Available | Positive | 138493 - 139497 | 35685.4 |
| diguanylate cyclase | CUU80_00565 | Not Available | Positive | 139520 - 141535 | 73259.9 |
| exodeoxyribonuclease iii | CUU80_00570 | Not Available | Negative | 141797 - 142657 | 32202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


