Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | CUU80_08635 | Not Available | Negative | 2103279 - 2105783 | 92710.6 |
| biotin--acetyl-coa-carboxylase ligase | CUU80_08640 | Not Available | Positive | 2106094 - 2107047 | 33478.9 |
| biotin biosynthesis protein bioy | CUU80_08645 | Not Available | Negative | 2107207 - 2107815 | 20123.1 |
| carboxylate--amine ligase | CUU80_08650 | Not Available | Positive | 2108270 - 2110195 | 69422.0 |
| methylmalonyl-coa carboxyltransferase | CUU80_08655 | Not Available | Positive | 2110188 - 2111795 | 56935.5 |
| type i polyketide synthase | CUU80_08660 | Not Available | Positive | 2111902 - 2121426 | 335506.0 |
| hypothetical protein | CUU80_08665 | Not Available | Negative | 2121960 - 2123003 | 37482.6 |
| abc transporter substrate-binding protein | CUU80_08670 | Not Available | Positive | 2123202 - 2124491 | 46108.6 |
| sugar abc transporter permease | CUU80_08675 | Not Available | Positive | 2124645 - 2125568 | 34008.1 |
| carbohydrate abc transporter permease | CUU80_08680 | Not Available | Positive | 2125565 - 2126401 | 30532.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


