Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CUU80_08475 | Not Available | Positive | 2047863 - 2048948 | 38391.4 |
| hypothetical protein | CUU80_08480 | Not Available | Negative | 2049062 - 2049292 | 8173.8 |
| methionine--trna ligase | CUU80_08490 | Not Available | Positive | 2050627 - 2052501 | 69223.5 |
| sugar abc transporter substrate-binding protein | CUU80_08495 | Not Available | Negative | 2053437 - 2054822 | 49882.2 |
| hypothetical protein | CUU80_08500 | Not Available | Positive | 2055163 - 2059224 | 147415.0 |
| hypothetical protein | CUU80_08505 | Not Available | Positive | 2059345 - 2060745 | 50250.5 |
| hypothetical protein | CUU80_08510 | Not Available | Positive | 2060928 - 2062193 | 44314.1 |
| hydrolase tatd | CUU80_08520 | Not Available | Positive | 2064326 - 2065282 | 35102.6 |
| potassium transporter kup | CUU80_08525 | Not Available | Positive | 2065843 - 2068083 | 81390.3 |
| class ii glutamine amidotransferase | CUU80_08530 | Not Available | Positive | 2068141 - 2069001 | 31359.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


