Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | CUU80_08375 | Not Available | Positive | 2019278 - 2020102 | 30129.0 |
| alpha-amylase | CUU80_08380 | Not Available | Positive | 2020144 - 2021790 | 62536.6 |
| macrolide abc transporter atp-binding protein | CUU80_08385 | Not Available | Positive | 2022128 - 2022829 | 25271.3 |
| abc transporter permease | CUU80_08390 | Not Available | Positive | 2022924 - 2025725 | 99840.2 |
| amino acid transporter | CUU80_08395 | Not Available | Positive | 2025915 - 2027423 | 55151.7 |
| toxin-antitoxin system hicb family antitoxin | CUU80_08400 | Not Available | Negative | 2028096 - 2028548 | 16757.1 |
| marr family transcriptional regulator | CUU80_08405 | Not Available | Positive | 2029403 - 2029981 | 22224.4 |
| multidrug abc transporter atp-binding protein | CUU80_08410 | Not Available | Positive | 2030136 - 2032007 | 68171.9 |
| abc transporter | CUU80_08415 | Not Available | Positive | 2032047 - 2033972 | 69776.8 |
| hypothetical protein | CUU80_08420 | Not Available | Negative | 2034425 - 2035414 | 34937.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


