Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-mannosidase | CUU80_08325 | Not Available | Positive | 2002088 - 2004892 | 102895.0 |
| hypothetical protein | CUU80_08330 | Not Available | Negative | 2004964 - 2006277 | 49143.9 |
| amino acid permease | CUU80_08335 | Not Available | Negative | 2006649 - 2008046 | 50232.6 |
| acetamidase | CUU80_08340 | Not Available | Negative | 2008085 - 2008987 | 32157.1 |
| aromatic amino acid transporter arop | CUU80_08345 | Not Available | Negative | 2009281 - 2010756 | 52811.3 |
| hypothetical protein | CUU80_08350 | Not Available | Negative | 2010949 - 2012055 | 41422.3 |
| laci family transcriptional regulator | CUU80_08355 | Not Available | Negative | 2012126 - 2013139 | 37031.0 |
| alpha-mannosidase | CUU80_08360 | Not Available | Negative | 2013348 - 2016500 | 116123.0 |
| sugar abc transporter substrate-binding protein | CUU80_08365 | Not Available | Positive | 2016824 - 2018143 | 46089.8 |
| sugar abc transporter permease | CUU80_08370 | Not Available | Positive | 2018316 - 2019275 | 34564.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


