Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhge/pip domain-containing protein | CUU80_08275 | Not Available | Negative | 1987620 - 1990409 | 99956.7 |
| nadph-dependent oxidoreductase | CUU80_08280 | Not Available | Negative | 1990567 - 1991337 | 28144.2 |
| hypothetical protein | CUU80_08285 | Not Available | Negative | 1991415 - 1991903 | 16947.1 |
| histidine phosphatase family protein | CUU80_08290 | Not Available | Positive | 1992140 - 1992787 | 23773.9 |
| abc transporter substrate-binding protein | CUU80_08295 | Not Available | Positive | 1993332 - 1994678 | 49029.1 |
| laci family transcriptional regulator | CUU80_08300 | Not Available | Negative | 1995606 - 1996622 | 37236.5 |
| sugar abc transporter permease | CUU80_08305 | Not Available | Positive | 1996987 - 1997841 | 31298.2 |
| carbohydrate abc transporter permease | CUU80_08310 | Not Available | Positive | 1997841 - 1998683 | 30937.1 |
| beta-carotene 15,15'-monooxygenase | CUU80_08315 | Not Available | Positive | 1999162 - 1999779 | 22626.5 |
| abc transporter | CUU80_08320 | Not Available | Negative | 2000004 - 2001860 | 69198.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


