Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CUU80_08225 | Not Available | Positive | 1975692 - 1976651 | 32692.8 |
| abc transporter substrate-binding protein | CUU80_08230 | Not Available | Positive | 1976871 - 1977815 | 32857.5 |
| amino acid abc transporter permease | CUU80_08235 | Not Available | Positive | 1977981 - 1978964 | 36087.1 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | CUU80_08240 | Not Available | Positive | 1978988 - 1979800 | 29268.5 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CUU80_08245 | Not Available | Positive | 1980221 - 1982113 | 68488.4 |
| 23s rrna pseudouridylate synthase | CUU80_08250 | Not Available | Positive | 1982466 - 1983173 | 27370.5 |
| laci family transcriptional regulator | CUU80_08255 | Not Available | Negative | 1983373 - 1984383 | 36477.6 |
| abc transporter permease | CUU80_08260 | Not Available | Positive | 1984596 - 1984710 | 4279.21 |
| hypothetical protein | CUU80_08265 | Not Available | Positive | 1985042 - 1985293 | 10156.1 |
| yhge/pip domain-containing protein | CUU80_08270 | Not Available | Negative | 1985299 - 1987623 | 81611.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


