Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | CUU80_08125 | Not Available | Negative | 1935027 - 1937672 | 94403.5 |
| duf58 domain-containing protein | CUU80_08130 | Not Available | Negative | 1937669 - 1938895 | 44706.7 |
| aaa family atpase | CUU80_08135 | Not Available | Negative | 1939013 - 1940629 | 57290.2 |
| aaa family atpase | CUU80_08140 | Not Available | Negative | 1940639 - 1946704 | 211155.0 |
| serine/threonine protein kinase | CUU80_08145 | Not Available | Negative | 1946811 - 1948229 | 50988.1 |
| nuclease | CUU80_08150 | Not Available | Positive | 1948360 - 1952793 | 160286.0 |
| atp-dependent dna helicase | CUU80_08155 | Not Available | Positive | 1952790 - 1956698 | 142587.0 |
| mfs transporter | CUU80_08160 | Not Available | Positive | 1956921 - 1958282 | 48303.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | CUU80_08165 | Not Available | Positive | 1958589 - 1959344 | 26269.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CUU80_08170 | Not Available | Positive | 1959571 - 1960476 | 31959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


