Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | CUU80_07975 | Not Available | Positive | 1882488 - 1883765 | 45457.9 |
| glycine cleavage system protein h | CUU80_07980 | Not Available | Positive | 1883799 - 1884212 | 15190.5 |
| abc transporter atp-binding protein | CUU80_07985 | Not Available | Positive | 1884302 - 1885645 | 48926.7 |
| s9 family peptidase | CUU80_07990 | Not Available | Positive | 1885690 - 1888236 | 94489.5 |
| 3-isopropylmalate dehydrogenase | CUU80_07995 | Not Available | Positive | 1888408 - 1889439 | 37381.5 |
| ligase | CUU80_08000 | Not Available | Positive | 1889721 - 1890929 | 43120.6 |
| crp/fnr family transcriptional regulator | CUU80_08005 | Not Available | Positive | 1890979 - 1891698 | 26816.1 |
| carboxypeptidase | CUU80_08010 | Not Available | Positive | 1891850 - 1894162 | 83078.7 |
| oxidoreductase | CUU80_08015 | Not Available | Positive | 1894678 - 1895793 | 39643.3 |
| quinone-dependent dihydroorotate dehydrogenase | CUU80_08020 | Not Available | Negative | 1895930 - 1897078 | 42613.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


