Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | CUU80_07715 | Not Available | Positive | 1815949 - 1817223 | 45333.8 |
| murr/rpir family transcriptional regulator | CUU80_07720 | Not Available | Negative | 1817290 - 1818159 | 31696.8 |
| anion transporter | CUU80_07725 | Not Available | Negative | 1818335 - 1819513 | 42910.0 |
| abc transporter atp-binding protein | CUU80_07730 | Not Available | Positive | 1820117 - 1820929 | 29494.6 |
| 2-aminoethylphosphonate--pyruvate transaminase | CUU80_07740 | Not Available | Positive | 1824014 - 1825222 | 44144.8 |
| phosphonoacetaldehyde hydrolase | CUU80_07745 | Not Available | Positive | 1825400 - 1826182 | 28060.2 |
| gntr family transcriptional regulator | CUU80_07750 | Not Available | Negative | 1826319 - 1828010 | 61888.4 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | CUU80_07755 | Not Available | Negative | 1828121 - 1828762 | 22798.0 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | CUU80_07760 | Not Available | Negative | 1828849 - 1829724 | 31104.5 |
| transcriptional regulator | CUU80_07765 | Not Available | Negative | 1829933 - 1830130 | 7304.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


