Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | CUU80_07660 | Not Available | Negative | 1802494 - 1804569 | 76875.3 |
| abc transporter substrate-binding protein | CUU80_07665 | Not Available | Negative | 1804843 - 1805736 | 31340.0 |
| transcriptional repressor | CUU80_07670 | Not Available | Negative | 1805928 - 1806320 | 14482.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CUU80_07680 | Not Available | Negative | 1807549 - 1808055 | 17681.3 |
| zn-dependent oxidoreductase | CUU80_07685 | Not Available | Negative | 1808508 - 1809500 | 34326.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CUU80_07690 | Not Available | Positive | 1809917 - 1811980 | 73534.6 |
| Trna-arg | Not Available | Not Available | Positive | 1812178 - 1812254 | Not Available |
| abc transporter | CUU80_07700 | Not Available | Positive | 1812426 - 1813220 | 29236.2 |
| abc transporter permease | CUU80_07705 | Not Available | Positive | 1813217 - 1814350 | 39737.3 |
| peptide abc transporter permease | CUU80_07710 | Not Available | Positive | 1814365 - 1815864 | 53826.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


