Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 1775687 - 1775762 | Not Available |
| amino acid lyase | CUU80_07565 | Not Available | Positive | 1775880 - 1776905 | 37362.2 |
| glycosyl transferase | CUU80_07570 | Not Available | Negative | 1776962 - 1778122 | 43037.8 |
| diaminopimelate aminotransferase | CUU80_07575 | Not Available | Negative | 1778277 - 1779455 | 41562.3 |
| formate-dependent phosphoribosylglycinamide formyltransferase | CUU80_07580 | Not Available | Positive | 1779673 - 1780968 | 45228.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CUU80_07585 | Not Available | Positive | 1781044 - 1781793 | 28041.6 |
| phosphoribosylformylglycinamidine synthase | CUU80_07590 | Not Available | Positive | 1781865 - 1785617 | 134579.0 |
| carboxy-cis,cis-muconate cyclase | CUU80_07595 | Not Available | Positive | 1785841 - 1787046 | 41687.1 |
| dna-deoxyinosine glycosylase | CUU80_07600 | Not Available | Positive | 1787040 - 1787582 | 19800.6 |
| sodium:proton antiporter | CUU80_07605 | Not Available | Negative | 1787568 - 1789055 | 51461.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


