Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| activase | CUU80_07155 | Not Available | Negative | 1684277 - 1689421 | 185846.0 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | CUU80_07160 | Not Available | Negative | 1689867 - 1690598 | 27756.9 |
| anaerobic ribonucleoside-triphosphate reductase | CUU80_07165 | Not Available | Negative | 1690755 - 1693160 | 90510.7 |
| Trna-asn | Not Available | Not Available | Positive | 1693562 - 1693637 | Not Available |
| exodeoxyribonuclease vii large subunit | CUU80_07175 | Not Available | Positive | 1693885 - 1695252 | 49009.9 |
| exodeoxyribonuclease vii small subunit | CUU80_07180 | Not Available | Positive | 1695301 - 1695609 | 10986.7 |
| long-chain fatty acid--coa ligase | CUU80_07185 | Not Available | Negative | 1695892 - 1697748 | 67246.3 |
| alpha-xylosidase | CUU80_07190 | Not Available | Negative | 1697987 - 1700398 | 88860.0 |
| abc transporter permease | CUU80_07195 | Not Available | Negative | 1700510 - 1701382 | 32080.1 |
| sugar abc transporter permease | CUU80_07200 | Not Available | Negative | 1701389 - 1702342 | 35362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


