Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro) deacylase | CUU80_00365 | Not Available | Negative | 94559 - 95068 | 17801.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CUU80_00370 | Not Available | Negative | 95363 - 96421 | 37771.4 |
| thiamine diphosphokinase | CUU80_00375 | Not Available | Negative | 96638 - 97363 | 25734.7 |
| spermidine synthase | CUU80_00380 | Not Available | Positive | 97558 - 99144 | 57125.5 |
| translation initiation factor if-3 | CUU80_00385 | Not Available | Positive | 99479 - 100231 | 27831.3 |
| 50s ribosomal protein l35 | CUU80_00390 | Not Available | Positive | 100212 - 100406 | 7037.86 |
| 50s ribosomal protein l20 | CUU80_00395 | Not Available | Positive | 100459 - 100842 | 14580.6 |
| tyrosine recombinase xerd | CUU80_00400 | Not Available | Positive | 101124 - 102065 | 34391.0 |
| chromosome partitioning atpase | CUU80_00405 | Not Available | Positive | 102246 - 103145 | 32245.9 |
| segregation/condensation protein a | CUU80_00410 | Not Available | Positive | 103218 - 104126 | 33139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


