Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | CUU80_06975 | Not Available | Negative | 1635269 - 1636420 | 41882.2 |
| dtmp kinase | CUU80_06980 | Not Available | Negative | 1636417 - 1637049 | 23200.6 |
| type i dna topoisomerase | CUU80_06985 | Not Available | Negative | 1637261 - 1640296 | 108429.0 |
| phosphoesterase | CUU80_06995 | Not Available | Negative | 1640458 - 1641690 | 42045.8 |
| penicillin-binding protein | CUU80_07005 | Not Available | Positive | 1642158 - 1644641 | 87685.1 |
| 2-isopropylmalate synthase | CUU80_07010 | Not Available | Negative | 1645064 - 1646980 | 70449.7 |
| hypothetical protein | CUU80_07015 | Not Available | Positive | 1647450 - 1648019 | 21252.9 |
| serine/threonine protein kinase | CUU80_07020 | Not Available | Positive | 1648260 - 1650854 | 88814.5 |
| metallophosphatase | CUU80_07025 | Not Available | Negative | 1651163 - 1652689 | 54999.8 |
| hypothetical protein | CUU80_07040 | Not Available | Negative | 1655594 - 1656214 | 22673.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


