Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| opca protein | CUU80_06715 | Not Available | Positive | 1564691 - 1565731 | 38128.2 |
| 6-phosphogluconolactonase | CUU80_06720 | Not Available | Positive | 1566023 - 1566895 | 31357.8 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | CUU80_06725 | Not Available | Negative | 1567234 - 1568688 | 52380.9 |
| aspartate aminotransferase | CUU80_06730 | Not Available | Positive | 1568898 - 1570088 | 43008.9 |
| hypothetical protein | CUU80_06735 | Not Available | Negative | 1570360 - 1571601 | 46043.9 |
| adhesin | CUU80_06740 | Not Available | Positive | 1571978 - 1573534 | 51397.9 |
| hypothetical protein | CUU80_06745 | Not Available | Positive | 1573624 - 1574295 | 21211.5 |
| yhge/pip domain-containing protein | CUU80_06755 | Not Available | Positive | 1577151 - 1579313 | 77375.9 |
| tetr/acrr family transcriptional regulator | CUU80_06760 | Not Available | Positive | 1579543 - 1580070 | 19599.6 |
| fmn-binding protein | CUU80_06765 | Not Available | Negative | 1580185 - 1580736 | 18892.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


