Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate synthase | CUU80_00315 | Not Available | Positive | 80962 - 82527 | 56389.7 |
| chromosome segregation protein smc | CUU80_00320 | Not Available | Positive | 82585 - 86295 | 135410.0 |
| peptidoglycan bridge formation protein femab | CUU80_00325 | Not Available | Negative | 86469 - 87467 | 37339.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CUU80_00330 | Not Available | Negative | 87561 - 89114 | 56740.9 |
| rna polymerase subunit sigma | CUU80_00335 | Not Available | Positive | 89297 - 90013 | 26655.8 |
| hypothetical protein | CUU80_00340 | Not Available | Positive | 90013 - 90366 | 12494.4 |
| hypothetical protein | CUU80_00345 | Not Available | Negative | 90501 - 90575 | 2820.53 |
| aldose epimerase | CUU80_00350 | Not Available | Negative | 90699 - 91646 | 34388.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CUU80_00355 | Not Available | Positive | 91808 - 92803 | 35417.2 |
| hypothetical protein | CUU80_00360 | Not Available | Positive | 92972 - 94339 | 47380.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


