Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | CUU80_06405 | Not Available | Negative | 1499770 - 1500522 | 27562.6 |
| duf1727 domain-containing protein | CUU80_06410 | Not Available | Negative | 1500561 - 1502234 | 59441.5 |
| replicative dna helicase | CUU80_06415 | Not Available | Negative | 1502237 - 1503571 | 49030.6 |
| mate family efflux transporter | CUU80_06420 | Not Available | Positive | 1503864 - 1505456 | 55394.6 |
| protein-pii uridylyltransferase | CUU80_06425 | Not Available | Negative | 1505467 - 1507293 | 67502.3 |
| p-ii family nitrogen regulator | CUU80_06430 | Not Available | Negative | 1507524 - 1507862 | 11740.0 |
| ammonium transporter | CUU80_06435 | Not Available | Negative | 1507864 - 1509162 | 44976.8 |
| signal recognition particle-docking protein ftsy | CUU80_06440 | Not Available | Negative | 1509481 - 1510716 | 43013.1 |
| tetr/acrr family transcriptional regulator | CUU80_06445 | Not Available | Positive | 1510819 - 1511565 | 27405.4 |
| glycosyl transferase | CUU80_06450 | Not Available | Positive | 1511720 - 1512763 | 39414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


