Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1472619 - 1472692 | Not Available |
| 50s ribosomal protein l9 | CUU80_06295 | Not Available | Negative | 1473073 - 1473519 | 15485.7 |
| 30s ribosomal protein s18 | CUU80_06300 | Not Available | Negative | 1473539 - 1473787 | 9418.72 |
| single-stranded dna-binding protein | CUU80_06305 | Not Available | Negative | 1473885 - 1474541 | 22591.6 |
| 30s ribosomal protein s6 | CUU80_06310 | Not Available | Negative | 1474615 - 1474905 | 11059.1 |
| ribose-phosphate pyrophosphokinase | CUU80_06330 | Not Available | Positive | 1478244 - 1479257 | 36854.6 |
| yggs family pyridoxal phosphate-dependent enzyme | CUU80_06335 | Not Available | Negative | 1479347 - 1480189 | 29414.4 |
| hypothetical protein | CUU80_06340 | Not Available | Negative | 1480576 - 1482552 | 72949.6 |
| carbohydrate abc transporter permease | CUU80_06345 | Not Available | Negative | 1482555 - 1483373 | 29772.5 |
| sugar abc transporter permease | CUU80_06350 | Not Available | Negative | 1483394 - 1484320 | 33842.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


