Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | CUU80_06190 | Not Available | Positive | 1446069 - 1446737 | 24466.4 |
| abc transporter substrate-binding protein | CUU80_06195 | Not Available | Positive | 1446975 - 1448597 | 57280.1 |
| valine--trna ligase | CUU80_06200 | Not Available | Positive | 1448698 - 1451475 | 103284.0 |
| chorismate mutase | CUU80_06205 | Not Available | Negative | 1451693 - 1452082 | 14203.7 |
| transcription termination factor rho | CUU80_06210 | Not Available | Negative | 1452367 - 1454496 | 77939.2 |
| hypothetical protein | CUU80_06215 | Not Available | Negative | 1454847 - 1456460 | 60911.0 |
| duf2469 domain-containing protein | CUU80_06220 | Not Available | Negative | 1456588 - 1456902 | 12414.4 |
| n-acetyltransferase | CUU80_06225 | Not Available | Negative | 1456909 - 1457961 | 38891.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | CUU80_06230 | Not Available | Negative | 1458164 - 1459663 | 54775.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | CUU80_06235 | Not Available | Negative | 1459692 - 1461233 | 54167.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


