Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | CUU80_00265 | Not Available | Negative | 68210 - 69667 | 53938.5 |
| voc family protein | CUU80_00270 | Not Available | Negative | 69714 - 70103 | 14586.3 |
| carbohydrate kinase | CUU80_00275 | Not Available | Negative | 70395 - 71291 | 32466.4 |
| nagc family transcriptional regulator | CUU80_00280 | Not Available | Negative | 71364 - 72578 | 43223.7 |
| nagc family transcriptional regulator | CUU80_00285 | Not Available | Negative | 72730 - 73854 | 40043.5 |
| glucosamine-6-phosphate deaminase | CUU80_00290 | Not Available | Positive | 74104 - 74916 | 28648.0 |
| n-acetylglucosamine-6-phosphate deacetylase | CUU80_00295 | Not Available | Positive | 75056 - 76366 | 45332.0 |
| adp-ribose pyrophosphatase | CUU80_00300 | Not Available | Negative | 76512 - 77033 | 19381.8 |
| xaa-pro aminopeptidase | CUU80_00305 | Not Available | Negative | 77243 - 78838 | 58427.6 |
| hypothetical protein | CUU80_00310 | Not Available | Negative | 79002 - 79994 | 37361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


