Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 1402426 - 1402497 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1402533 - 1402605 | Not Available |
| flavin reductase | CUU80_05985 | Not Available | Positive | 1402952 - 1403512 | 19897.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | CUU80_05990 | Not Available | Positive | 1403672 - 1404175 | 17902.1 |
| hypothetical protein | CUU80_05995 | Not Available | Positive | 1404543 - 1405904 | 49530.2 |
| tetr/acrr family transcriptional regulator | CUU80_06000 | Not Available | Positive | 1406126 - 1406812 | 26346.1 |
| aspartate ammonia-lyase | CUU80_06005 | Not Available | Positive | 1407037 - 1408443 | 50402.4 |
| transporter | CUU80_06010 | Not Available | Positive | 1408596 - 1409393 | 27975.3 |
| cpbp family intramembrane metalloprotease domain-containing protein | CUU80_06015 | Not Available | Negative | 1409525 - 1410523 | 36837.7 |
| abc transporter atp-binding protein | CUU80_06020 | Not Available | Negative | 1410893 - 1412038 | 41083.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


