Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | CUU80_05875 | Not Available | Negative | 1381286 - 1382932 | 59119.8 |
| laci family transcriptional regulator | CUU80_05880 | Not Available | Negative | 1383191 - 1384306 | 40612.8 |
| ribonuclease hii | CUU80_05885 | Not Available | Negative | 1384521 - 1385249 | 25596.3 |
| signal peptidase i | CUU80_05890 | Not Available | Negative | 1385414 - 1386292 | 31622.1 |
| 50s ribosomal protein l19 | CUU80_05895 | Not Available | Negative | 1386478 - 1386843 | 13604.6 |
| laci family transcriptional regulator | CUU80_05900 | Not Available | Negative | 1387050 - 1388075 | 37156.7 |
| mfs transporter | CUU80_05905 | Not Available | Positive | 1388362 - 1389624 | 44489.6 |
| alpha-l-arabinofuranosidase | CUU80_05910 | Not Available | Positive | 1389791 - 1391368 | 58246.1 |
| aaa family atpase | CUU80_05915 | Not Available | Positive | 1391719 - 1392885 | 43914.6 |
| duf1893 domain-containing protein | CUU80_05920 | Not Available | Negative | 1392950 - 1393378 | 14357.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


