Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | CUU80_05515 | Not Available | Negative | 1288306 - 1288947 | 22543.2 |
| 30s ribosomal protein s10 | CUU80_05520 | Not Available | Negative | 1288964 - 1289272 | 11551.1 |
| hypothetical protein | CUU80_05525 | Not Available | Negative | 1289967 - 1290773 | 30844.0 |
| acetolactate decarboxylase | CUU80_05530 | Not Available | Positive | 1291202 - 1291969 | 27745.6 |
| hypothetical protein | CUU80_05535 | Not Available | Positive | 1292036 - 1292869 | 30270.8 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | CUU80_05540 | Not Available | Negative | 1292967 - 1295696 | 98805.6 |
| nagc family transcriptional regulator | CUU80_05545 | Not Available | Positive | 1296154 - 1297311 | 42717.8 |
| glycogen debranching enzyme glgx | CUU80_05550 | Not Available | Positive | 1297401 - 1300115 | 101158.0 |
| 30s ribosomal protein s9 | CUU80_05555 | Not Available | Negative | 1300299 - 1300790 | 17608.9 |
| 50s ribosomal protein l13 | CUU80_05560 | Not Available | Negative | 1300813 - 1301262 | 16553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


