Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_05265 | Not Available | Negative | 1248076 - 1248660 | 20366.6 |
| dna repair protein rada | CUU80_05270 | Not Available | Positive | 1248954 - 1250390 | 50286.2 |
| adenosylhomocysteinase | CUU80_05275 | Not Available | Positive | 1250477 - 1252006 | 54834.0 |
| cytosine deaminase | CUU80_05280 | Not Available | Positive | 1252003 - 1253388 | 50745.1 |
| cupin | CUU80_05285 | Not Available | Positive | 1253520 - 1254005 | 17056.8 |
| amino acid abc transporter substrate-binding protein | CUU80_05290 | Not Available | Positive | 1254143 - 1255006 | 30679.0 |
| abc transporter permease | CUU80_05295 | Not Available | Positive | 1255149 - 1256009 | 31287.0 |
| peptide abc transporter atp-binding protein | CUU80_05300 | Not Available | Positive | 1256018 - 1256803 | 29051.9 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | CUU80_05305 | Not Available | Negative | 1256981 - 1258105 | 41458.2 |
| trna pseudouridine(55) synthase trub | CUU80_05310 | Not Available | Negative | 1258235 - 1259356 | 40188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


