Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 1220387 - 1220463 | Not Available |
| mfs transporter | CUU80_05165 | Not Available | Positive | 1220625 - 1221815 | 41615.0 |
| hypothetical protein | CUU80_05170 | Not Available | Positive | 1222035 - 1224197 | 78668.4 |
| duf4125 domain-containing protein | CUU80_05175 | Not Available | Positive | 1224442 - 1225071 | 23918.7 |
| alpha/beta hydrolase | CUU80_05180 | Not Available | Negative | 1225144 - 1226892 | 61942.8 |
| hypothetical protein | CUU80_05185 | Not Available | Negative | 1226993 - 1227937 | 32476.6 |
| pspc family transcriptional regulator | CUU80_05190 | Not Available | Negative | 1227949 - 1230075 | 75060.3 |
| histidine kinase | CUU80_05195 | Not Available | Positive | 1230249 - 1231610 | 47701.9 |
| dna-binding response regulator | CUU80_05200 | Not Available | Positive | 1231607 - 1232305 | 24679.5 |
| udp-glucose 4-epimerase gale | CUU80_05205 | Not Available | Negative | 1232472 - 1233497 | 37261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


