Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_05110 | Not Available | Negative | 1208475 - 1209245 | 26264.3 |
| chap domain-containing protein | CUU80_05115 | Not Available | Negative | 1209437 - 1210399 | 33147.3 |
| phosphoserine transaminase | CUU80_05120 | Not Available | Positive | 1210633 - 1211775 | 40794.2 |
| duf2530 domain-containing protein | CUU80_05125 | Not Available | Positive | 1211910 - 1212164 | 9468.98 |
| atpase | CUU80_05130 | Not Available | Negative | 1212242 - 1213435 | 43534.0 |
| phosphate transport system regulatory protein phou | CUU80_05135 | Not Available | Positive | 1213628 - 1214302 | 24690.3 |
| phosphoglyceromutase | CUU80_05140 | Not Available | Negative | 1214696 - 1215436 | 27644.8 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | CUU80_05145 | Not Available | Negative | 1215632 - 1216600 | 33985.1 |
| mfs transporter | CUU80_05150 | Not Available | Negative | 1216840 - 1218063 | 43292.5 |
| lysine--trna ligase | CUU80_05155 | Not Available | Negative | 1218448 - 1220127 | 61825.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


