Phyllobacterium brassicacearum strain STM 196

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium brassicacearum strain STM 196 is a Gram-negative, rod-shaped bacterium that resides in the rhizosphere, the region of soil adjacent to plant roots. This strain is characterized by having a single replicon, indicating a streamlined genomic structure. Notably, it has been documented to associate with several plant hosts, including Triticum aestivum (common wheat), Hordeum vulgare (barley), and Lathyrus oleraceus (grass pea). The association of P. brassicacearum STM 196 with these important agricultural crops highlights its potential role in plant-microbe interactions, particularly in the rhizosphere environment. Microbial communities in the rhizosphere are crucial for nutrient cycling, soil health, and plant growth promotion. Given its specific habitat and host associations, this strain may contribute to beneficial plant-microbe relationships, which can enhance the growth and resilience of these crops. The presence of P. brassicacearum STM 196 in the rhizosphere could suggest its involvement in processes such as nitrogen fixation, biocontrol of plant pathogens, or promotion of plant health. The strain's documented accession number is PGGO00000000.1, which provides a reference for further genomic studies that could explore its metabolic capabilities and ecological functions. Understanding the role of this bacterium within its ecological niche could inform agricultural practices aimed at improving crop yield and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium brassicacearum
Strainstrain STM 196

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Triticum aestivum, Hordeum vulgare, Lathyrus oleraceus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium brassicacearum strain STM 196

Gene Summary

Adenine Count

1238344 bp

Thymine Count

1234580 bp

Guanine Count

1656732 bp

Cytosine Count

1664338 bp

Genome Length

5793994 bp

Protein-coding Genes

5522 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glsb/yeaq/ymge family stress response membrane proteinCU102_08775Not AvailablePositive1737951 - 17382058429.96
multidrug efflux proteinCU102_08780Not AvailableNegative1738283 - 1741369110207.0
efflux transporter periplasmic adaptor subunitCU102_08785Not AvailableNegative1741366 - 174259543353.4
tetr/acrr family transcriptional regulatorCU102_08790Not AvailablePositive1742757 - 174333521502.6
trna guanosine(34) transglycosylase tgtCU102_08795Not AvailableNegative1743336 - 174447241909.7
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaCU102_08800Not AvailableNegative1744469 - 174554839616.9
peptidylprolyl isomeraseCU102_08805Not AvailableNegative1745566 - 174607518516.8
peptidylprolyl isomeraseCU102_08810Not AvailableNegative1746103 - 174668120696.6
pantetheine-phosphate adenylyltransferaseCU102_08815Not AvailableNegative1746699 - 174719317758.6
dna gyrase subunit aCU102_08820Not AvailableNegative1747540 - 175025799615.0

Displaying genes 1771 – 1780 of 5617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.