Phyllobacterium endophyticum strain PEPV15

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium endophyticum strain PEPV15 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, indicating its preference for moderate temperature environments. It is notable for having a single replicon and is classified as non-spore-forming, which suggests that it does not produce spores as a means of survival under adverse conditions. The accession number for this strain is PGGN00000000.1, which serves as a unique identifier in genomic databases. The specific traits of P. endophyticum strain PEPV15 highlight its potential ecological role, particularly in association with plant hosts. As an endophytic bacterium, it may contribute to plant health and growth by enhancing nutrient availability or providing protection against pathogens. The aerobic nature of this strain implies that it is well-adapted to environments rich in oxygen, which is common in many plant tissues. Understanding the characteristics of Phyllobacterium endophyticum strain PEPV15 not only enriches our knowledge of microbial diversity but also emphasizes the significance of endophytic bacteria in ecological interactions, particularly in plant-microbe relationships. Further studies may elucidate the specific benefits this bacterium provides to its plant hosts and its overall role in ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium endophyticum
Strainstrain PEPV15

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium endophyticum strain PEPV15

Gene Summary

Adenine Count

1185956 bp

Thymine Count

1184303 bp

Guanine Count

1566972 bp

Cytosine Count

1575304 bp

Genome Length

5512535 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyproline-2-epimeraseCU100_00325Not AvailableNegative63348 - 6434936414.5
amino acid dehydrogenaseCU100_00330Not AvailableNegative64358 - 6562045334.8
dihydrodipicolinate synthase family proteinCU100_00335Not AvailableNegative65628 - 6651832406.0
gntr family transcriptional regulatorCU100_00340Not AvailablePositive66600 - 6725323754.3
methylmalonate-semialdehyde dehydrogenase (coa acylating)CU100_00345Not AvailableNegative67289 - 6878553598.3
lysr family transcriptional regulatorCU100_00350Not AvailablePositive68902 - 6978332423.0
hypothetical proteinCU100_00355Not AvailablePositive69880 - 7023013618.1
macrolide abc transporter permease/atp-binding protein macbCU100_00360Not AvailableNegative70236 - 7217968614.1
macrolide transporter subunit macaCU100_00365Not AvailableNegative72182 - 7346845731.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhCU100_00370Not AvailableNegative73633 - 7411517766.6

Displaying genes 111 – 120 of 5186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.