Phyllobacterium sophorae strain CCBAU 03422

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium sophorae strain CCBAU 03422 is characterized as a Gram-negative, rod-shaped bacterium. This classification indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for Gram-negative bacteria. The strain has a single replicon, suggesting that it typically contains one circular chromosome, which is a common feature in many bacterial species. The genomic information for Phyllobacterium sophorae strain CCBAU 03422 is accessible under the accession number PGGM00000000.1. This genomic data can provide insights into the metabolic pathways and genetic characteristics of the strain, although specific details on its metabolic capabilities or ecological roles are not provided. While the ecological insights regarding Phyllobacterium sophorae strain CCBAU 03422 are limited, its classification within the Phyllobacterium genus suggests potential roles in plant interactions. Members of this genus are often associated with plants, where they can contribute to nitrogen fixation or influence plant health through microbial interactions. Therefore, the study of this strain could be valuable for understanding its potential applications in agriculture or plant microbiome research, particularly in the context of sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium sophorae
Strainstrain CCBAU 03422

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium sophorae strain CCBAU 03422

Gene Summary

Adenine Count

1361880 bp

Thymine Count

1369756 bp

Guanine Count

1818384 bp

Cytosine Count

1808379 bp

Genome Length

6358399 bp

Protein-coding Genes

5944 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinoprotein dehydrogenase-associated soxyz-like carrierCU103_19105Not AvailablePositive3918955 - 391977329193.9
hypothetical proteinCU103_19110Not AvailableNegative3919783 - 392013312389.7
pqq-dependent dehydrogenase, methanol/ethanol familyCU103_19115Not AvailablePositive3920586 - 392241566014.7
c-type cytochrome, methanol metabolism-relatedCU103_19120Not AvailablePositive3922579 - 392310318541.8
quinoprotein dehydrogenase-associated putative abc transporter substrate-binding proteinCU103_19125Not AvailablePositive3923128 - 392396730470.8
rhodaneseCU103_19130Not AvailablePositive3924033 - 392455419490.4
pyrroloquinoline quinone precursor peptide pqqaCU103_19135Not AvailablePositive3924634 - 39247293540.51
pyrroloquinoline quinone biosynthesis protein pqqbCU103_19140Not AvailablePositive3924827 - 392576533601.1
pyrroloquinoline quinone biosynthesis protein cCU103_19145Not AvailablePositive3925762 - 392651727721.1
pyrroloquinoline quinone biosynthesis peptide chaperone pqqdCU103_19150Not AvailablePositive3926514 - 392681311408.9

Displaying genes 3761 – 3770 of 5999 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.