Phyllobacterium sophorae strain CCBAU 03422

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium sophorae strain CCBAU 03422 is characterized as a Gram-negative, rod-shaped bacterium. This classification indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for Gram-negative bacteria. The strain has a single replicon, suggesting that it typically contains one circular chromosome, which is a common feature in many bacterial species. The genomic information for Phyllobacterium sophorae strain CCBAU 03422 is accessible under the accession number PGGM00000000.1. This genomic data can provide insights into the metabolic pathways and genetic characteristics of the strain, although specific details on its metabolic capabilities or ecological roles are not provided. While the ecological insights regarding Phyllobacterium sophorae strain CCBAU 03422 are limited, its classification within the Phyllobacterium genus suggests potential roles in plant interactions. Members of this genus are often associated with plants, where they can contribute to nitrogen fixation or influence plant health through microbial interactions. Therefore, the study of this strain could be valuable for understanding its potential applications in agriculture or plant microbiome research, particularly in the context of sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium sophorae
Strainstrain CCBAU 03422

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium sophorae strain CCBAU 03422

Gene Summary

Adenine Count

1361880 bp

Thymine Count

1369756 bp

Guanine Count

1818384 bp

Cytosine Count

1808379 bp

Genome Length

6358399 bp

Protein-coding Genes

5944 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-deoxy-glucuronate isomeraseCU103_11710Not AvailableNegative2390762 - 239155928987.3
hypothetical proteinCU103_11715Not AvailableNegative2391564 - 23917858308.84
myo-inosose-2 dehydrataseCU103_11720Not AvailableNegative2391799 - 239271633913.7
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)CU103_11725Not AvailableNegative2392770 - 239462066175.3
5-dehydro-2-deoxygluconokinaseCU103_11730Not AvailableNegative2394698 - 239663870306.1
duf2191 domain-containing proteinCU103_11735Not AvailablePositive2396838 - 23970508066.71
vapc toxin family pin domain ribonucleaseCU103_11740Not AvailablePositive2397047 - 239743614597.1
rpir family transcriptional regulatorCU103_11745Not AvailableNegative2397440 - 239827330094.9
myo-inositol 2-dehydrogenaseCU103_11750Not AvailablePositive2398510 - 239961940996.1
inositol 2-dehydrogenaseCU103_11755Not AvailableNegative2399850 - 240083935331.1

Displaying genes 2301 – 2310 of 5999 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.