Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Brevirhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Brevirhabdus |
| Species | Brevirhabdus pacifica |
| Strain | strain DSM 27767 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Pacific Clarion-Clipperton Fracture Zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
572747 bp
Thymine Count
570067 bp
Guanine Count
1140522 bp
Cytosine Count
1141241 bp
Genome Length
3424577 bp
Protein-coding Genes
3168 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | CLV77_0433 | Not Available | Positive | 423558 - 423941 | 14068.8 |
| protocatechuate 3,4-dioxygenase beta subunit | CLV77_0434 | Not Available | Positive | 423938 - 424681 | 27873.2 |
| protocatechuate 3,4-dioxygenase alpha subunit | CLV77_0435 | Not Available | Positive | 424681 - 425280 | 21641.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | CLV77_0436 | Not Available | Positive | 425319 - 426380 | 37419.9 |
| gntr family transcriptional regulator | CLV77_0437 | Not Available | Negative | 426464 - 427171 | 26580.2 |
| glutamate--putrescine ligase | CLV77_0438 | Not Available | Positive | 427307 - 428662 | 49736.9 |
| gamma-glutamylputrescine oxidase | CLV77_0439 | Not Available | Positive | 428662 - 429972 | 46972.2 |
| putrescine transport system substrate-binding protein | CLV77_0440 | Not Available | Positive | 430056 - 431153 | 39584.6 |
| putrescine transport system atp-binding protein | CLV77_0441 | Not Available | Positive | 431216 - 432400 | 42889.7 |
| putrescine transport system permease protein | CLV77_0442 | Not Available | Positive | 432397 - 433344 | 34351.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
