Brevirhabdus pacifica strain DSM 27767

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Brevirhabdus

Description

Brevirhabdus pacifica strain DSM 27767 is a notable bacterium characterized by a single replicon, indicating a streamlined genetic structure. The strain is cataloged under the accession number PGFI00000000.1, which is essential for referencing its genetic information in public databases. As a member of the Brevirhabdus genus, this strain is likely to exhibit specific metabolic capabilities and ecological roles, although detailed functional characteristics are not provided. The presence of a single replicon may suggest adaptations that confer efficiency in replication and resource utilization under particular environmental conditions. The ecological insight into Brevirhabdus pacifica strain DSM 27767 lies in its potential role in its native habitat. While specific ecological interactions are not documented, the simplicity of its genomic architecture may position it advantageously in environments where rapid adaptation and growth are beneficial. Such traits could be critical in niche environments, influencing microbial community dynamics and nutrient cycling. In summary, Brevirhabdus pacifica strain DSM 27767 is defined by its single replicon and genetic accession PGFI00000000.1, reflecting a potential for efficient adaptation in its ecological niche, although further research is needed to elucidate its specific roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusBrevirhabdus
SpeciesBrevirhabdus pacifica
Strainstrain DSM 27767

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPacific Clarion-Clipperton Fracture Zone
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevirhabdus pacifica strain DSM 27767 Ga0181023_109, whole genome

Gene Summary

Adenine Count

572747 bp

Thymine Count

570067 bp

Guanine Count

1140522 bp

Cytosine Count

1141241 bp

Genome Length

3424577 bp

Protein-coding Genes

3168 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter substrate-binding protein (haat family)CLV77_0169Not AvailablePositive161058 - 16235346804.3
amino acid/amide abc transporter atp-binding protein 2 (haat family)CLV77_0170Not AvailablePositive162429 - 16325330394.6
phenylacetate-coa ligaseCLV77_0171Not AvailablePositive163384 - 16462543402.8
putative peptidoglycan binding proteinCLV77_0172Not AvailablePositive164644 - 16633262206.3
lsu ribosomal protein l36pCLV77_0173Not AvailableNegative166493 - 1666185082.38
Trna-valNot AvailableNot AvailablePositive166687 - 166761Not Available
n-formylglutamate amidohydrolaseCLV77_0175Not AvailablePositive166915 - 16777531591.6
dna polymerase-4CLV77_0176Not AvailableNegative167779 - 16907147119.9
orotidine-5'-phosphate decarboxylaseCLV77_0177Not AvailableNegative169131 - 16986225069.1
hypothetical proteinCLV77_0178Not AvailablePositive170042 - 17050315030.2

Displaying genes 251 – 260 of 3279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.