Brevirhabdus pacifica strain DSM 27767

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Brevirhabdus

Description

Brevirhabdus pacifica strain DSM 27767 is a notable bacterium characterized by a single replicon, indicating a streamlined genetic structure. The strain is cataloged under the accession number PGFI00000000.1, which is essential for referencing its genetic information in public databases. As a member of the Brevirhabdus genus, this strain is likely to exhibit specific metabolic capabilities and ecological roles, although detailed functional characteristics are not provided. The presence of a single replicon may suggest adaptations that confer efficiency in replication and resource utilization under particular environmental conditions. The ecological insight into Brevirhabdus pacifica strain DSM 27767 lies in its potential role in its native habitat. While specific ecological interactions are not documented, the simplicity of its genomic architecture may position it advantageously in environments where rapid adaptation and growth are beneficial. Such traits could be critical in niche environments, influencing microbial community dynamics and nutrient cycling. In summary, Brevirhabdus pacifica strain DSM 27767 is defined by its single replicon and genetic accession PGFI00000000.1, reflecting a potential for efficient adaptation in its ecological niche, although further research is needed to elucidate its specific roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusBrevirhabdus
SpeciesBrevirhabdus pacifica
Strainstrain DSM 27767

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPacific Clarion-Clipperton Fracture Zone
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevirhabdus pacifica strain DSM 27767 Ga0181023_109, whole genome

Gene Summary

Adenine Count

572747 bp

Thymine Count

570067 bp

Guanine Count

1140522 bp

Cytosine Count

1141241 bp

Genome Length

3424577 bp

Protein-coding Genes

3168 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps-assembly lipoproteinCLV77_0082Not AvailableNegative67348 - 6788118664.3
leucyl-trna synthetaseCLV77_0083Not AvailableNegative67868 - 7043295127.4
uncharacterized protein duf3576CLV77_0084Not AvailableNegative70511 - 7101118295.8
outer membrane protein ompuCLV77_0085Not AvailablePositive71429 - 7239432032.8
tfp pilus assembly protein pilfCLV77_0086Not AvailablePositive72563 - 7479179527.3
hypothetical proteinCLV77_0087Not AvailablePositive74778 - 7543423530.4
l,d-peptidoglycan transpeptidase ykud (erfk/ybis/ycfs/ynhg family)CLV77_0088Not AvailableNegative75513 - 7604019349.3
gtp cyclohydrolase iiCLV77_0089Not AvailableNegative76037 - 7712238285.3
winged helix family two component transcriptional regulatorCLV77_0090Not AvailablePositive77370 - 7805625835.0
exodeoxyribonuclease-3CLV77_0091Not AvailablePositive78261 - 7904929607.9

Displaying genes 161 – 170 of 3279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.