Shewanella sp. CG12_big_fil_rev_8_21_14_0_65_47_15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sp. CG12_big_fil_rev_8_21_14_0_65_47_15 is a bacterial isolate characterized by the presence of flagella, which suggests potential motility. The presence of flagella can play a crucial role in the organism's ability to navigate its environment, possibly aiding in colonization or biofilm formation. This strain has a single replicon, indicating a streamlined genomic structure, which can be advantageous for efficient replication and regulation of genetic material. The genomic data for Shewanella sp. CG12 is cataloged under the accession number PFGL00000000.1, which provides a reference for further genomic analysis and comparisons with other Shewanella species. The Shewanella genus is known for its versatility in various ecological niches, especially in aquatic environments, where they contribute to biogeochemical cycles, particularly in the reduction of metal ions. The motility conferred by flagella may enhance the organism's ability to interact with its environment, such as scavenging for nutrients or participating in electron transfer processes in sediment-based ecosystems. Overall, Shewanella sp. CG12_big_fil_rev_8_21_14_0_65_47_15 demonstrates key traits that align with the ecological role of Shewanella species as important players in microbial communities, particularly in environments where electron acceptors are limited, thus contributing to the cycling of elements like carbon and nitrogen.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sp. CG12_big_fil_rev_8_21_14_0_65_47_15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sp. CG12_big_fil_rev_8_21_14_0_65_47_15


Gene Summary

Adenine Count

1255066 bp

Thymine Count

1247446 bp

Guanine Count

1102475 bp

Cytosine Count

1110810 bp

Genome Length

4717377 bp

Protein-coding Genes

3953 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium:calcium antiporterCOW15_00805Not AvailableNegative191788 - 19271732232.4
ferritinCOW15_00810Not AvailableNegative192842 - 19337820346.2
molybdopterin molybdotransferaseCOW15_00815Not AvailablePositive193705 - 19495844801.8
molybdopterin-synthase adenylyltransferase moebCOW15_00820Not AvailablePositive194968 - 19572927638.7
duf333 domain-containing proteinCOW15_00825Not AvailablePositive195766 - 1960419952.91
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfCOW15_00830Not AvailableNegative196084 - 19719040619.1
flagellar basal body-associated protein flilCOW15_00835Not AvailableNegative197268 - 19768415723.1
chorismate--pyruvate lyaseCOW15_00840Not AvailablePositive197786 - 19835821462.8
peptidase m6COW15_00845Not AvailableNegative198417 - 20122199852.8
hypothetical proteinCOW15_00850Not AvailableNegative201693 - 20228621432.5

Displaying genes 171 – 180 of 4044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.