Stenotrophomonas indicatrix strain WS40

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas indicatrix strain WS40 is a rod-shaped bacterium that possesses flagella, enabling motility. This strain is characterized by having a single replicon, which may contribute to its genetic stability and adaptability in various environments. The presence of flagella suggests that S. indicatrix strain WS40 can actively move towards favorable conditions, potentially enhancing its survival and ecological interactions. The strain is cataloged in a specific accession, PEJS00000000.1, which provides a reference for researchers studying its genetic and phenotypic traits. Understanding the characteristics of Stenotrophomonas indicatrix strain WS40 is crucial for assessing its ecological roles, particularly in nutrient cycling and plant interactions. The motility conferred by flagella might allow this bacterium to inhabit diverse ecological niches, where it could engage in beneficial or competitive interactions with other microbial communities. The single replicon may also indicate a streamlined genetic organization, which can influence its adaptability to environmental changes. In summary, Stenotrophomonas indicatrix strain WS40's rod shape, motility via flagella, and single replicon position it as an interesting subject for further ecological and microbiological research, particularly regarding its role in its native habitat and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas indicatrix
Strainstrain WS40

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas indicatrix strain WS40

Gene Summary

Adenine Count

762683 bp

Thymine Count

768274 bp

Guanine Count

1514298 bp

Cytosine Count

1513142 bp

Genome Length

4558397 bp

Protein-coding Genes

4029 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent rrna methyltransferaseCR918_19130Not AvailableNegative4180463 - 418163243596.1
hypothetical proteinCR918_19135Not AvailablePositive4181927 - 418288335202.4
rhomboid family intramembrane serine proteaseCR918_19140Not AvailablePositive4182990 - 418376027497.4
glycerophosphodiester phosphodiesteraseCR918_19145Not AvailableNegative4183849 - 418496439791.4
nad-dependent dna ligaseCR918_19150Not AvailableNegative4185070 - 418595733037.1
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeCR918_19155Not AvailableNegative4186145 - 418749447957.1
polysaccharide deacetylaseCR918_19160Not AvailableNegative4187498 - 419016797686.1
membrane protein insertase yidcCR918_19165Not AvailableNegative4190297 - 419201263433.8
ribonuclease p protein componentCR918_19170Not AvailableNegative4192012 - 419250618021.7
50s ribosomal protein l34CR918_19175Not AvailableNegative4192512 - 41926525383.72

Displaying genes 3801 – 3810 of 4136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.