Stenotrophomonas indicatrix strain WS40

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas indicatrix strain WS40 is a rod-shaped bacterium that possesses flagella, enabling motility. This strain is characterized by having a single replicon, which may contribute to its genetic stability and adaptability in various environments. The presence of flagella suggests that S. indicatrix strain WS40 can actively move towards favorable conditions, potentially enhancing its survival and ecological interactions. The strain is cataloged in a specific accession, PEJS00000000.1, which provides a reference for researchers studying its genetic and phenotypic traits. Understanding the characteristics of Stenotrophomonas indicatrix strain WS40 is crucial for assessing its ecological roles, particularly in nutrient cycling and plant interactions. The motility conferred by flagella might allow this bacterium to inhabit diverse ecological niches, where it could engage in beneficial or competitive interactions with other microbial communities. The single replicon may also indicate a streamlined genetic organization, which can influence its adaptability to environmental changes. In summary, Stenotrophomonas indicatrix strain WS40's rod shape, motility via flagella, and single replicon position it as an interesting subject for further ecological and microbiological research, particularly regarding its role in its native habitat and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas indicatrix
Strainstrain WS40

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas indicatrix strain WS40

Gene Summary

Adenine Count

762683 bp

Thymine Count

768274 bp

Guanine Count

1514298 bp

Cytosine Count

1513142 bp

Genome Length

4558397 bp

Protein-coding Genes

4029 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ef-p beta-lysylation protein epmbCR918_12235Not AvailablePositive2644796 - 264583637777.6
sensor domain-containing phosphodiesteraseCR918_12240Not AvailableNegative2645841 - 264796777154.9
rna methyltransferaseCR918_12245Not AvailableNegative2648381 - 264915127826.4
inositol monophosphataseCR918_12250Not AvailablePositive2649272 - 265009929917.8
protease htpxCR918_12255Not AvailableNegative2650750 - 265161630637.7
trna glutamyl-q(34) synthetase gluqrsCR918_12260Not AvailablePositive2651709 - 265262932772.2
beta-ketoacyl-acp reductaseCR918_12265Not AvailablePositive2652647 - 265338726538.6
polyhydroxyalkanoate synthesis repressor pharCR918_12270Not AvailablePositive2653566 - 265411120190.9
trab/gumn family proteinCR918_12275Not AvailableNegative2654192 - 265513034653.2
hypothetical proteinCR918_12280Not AvailableNegative2655133 - 265606233828.9

Displaying genes 2441 – 2450 of 4136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.