Paenibacillus sp. LK1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. LK1 is characterized by possessing a single replicon, indicating a streamlined genomic organization typical of some bacteria within the Paenibacillus genus. This trait may facilitate efficient replication and regulation of genetic material, which can be advantageous for adaptation and survival in various environments. The genome of Paenibacillus sp. LK1 is cataloged under the accession number PEII00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The sequencing of its genome can extend insights into its metabolic capabilities, ecological roles, and potential biotechnological uses, although specific metabolic pathways and ecological functions are not detailed in the provided data. In a broader ecological context, members of the Paenibacillus genus are known for their versatility in diverse habitats, including soil and plant-associated environments. They are often involved in nitrogen fixation and contribute to soil health, nutrient cycling, and plant growth promotion. The traits of Paenibacillus sp. LK1 could suggest a role in these ecological processes, supporting its potential as a beneficial microorganism in agricultural applications or bioremediation efforts. In summary, the single-replicon structure of Paenibacillus sp. LK1 and its genomic reference PEII00000000.1 lay the groundwork for further exploration into its biological significance and ecological contributions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. LK1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. LK1 scaffold49, whole genome shotgun sequence.

Gene Summary

Adenine Count

1934121 bp

Thymine Count

1960628 bp

Guanine Count

1612457 bp

Cytosine Count

1656750 bp

Genome Length

7164189 bp

Protein-coding Genes

6233 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4044 domain-containing proteinCS562_21625Not AvailablePositive4771956 - 47720573900.2
lipoyl(octanoyl) transferaseCS562_21630Not AvailableNegative4772084 - 477279126564.8
2-oxo acid dehydrogenase subunit e2CS562_21635Not AvailableNegative4772958 - 477441251967.1
alpha-ketoacid dehydrogenase subunit betaCS562_21640Not AvailableNegative4774461 - 477544736049.7
2-oxoisovalerate dehydrogenaseCS562_21645Not AvailableNegative4775450 - 477647837822.8
dihydrolipoyl dehydrogenaseCS562_21650Not AvailableNegative4776618 - 477804250809.5
duf2627 domain-containing proteinCS562_21655Not AvailablePositive4778287 - 477861011943.8
two pore domain potassium channel family proteinCS562_21660Not AvailablePositive4778797 - 477914412811.0
hypothetical proteinCS562_21665Not AvailableNegative4779153 - 47793658025.5
thymidine kinaseCS562_21670Not AvailablePositive4779550 - 478014321835.5

Displaying genes 4291 – 4300 of 6390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.