Paenibacillus sp. LK1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. LK1 is characterized by possessing a single replicon, indicating a streamlined genomic organization typical of some bacteria within the Paenibacillus genus. This trait may facilitate efficient replication and regulation of genetic material, which can be advantageous for adaptation and survival in various environments. The genome of Paenibacillus sp. LK1 is cataloged under the accession number PEII00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The sequencing of its genome can extend insights into its metabolic capabilities, ecological roles, and potential biotechnological uses, although specific metabolic pathways and ecological functions are not detailed in the provided data. In a broader ecological context, members of the Paenibacillus genus are known for their versatility in diverse habitats, including soil and plant-associated environments. They are often involved in nitrogen fixation and contribute to soil health, nutrient cycling, and plant growth promotion. The traits of Paenibacillus sp. LK1 could suggest a role in these ecological processes, supporting its potential as a beneficial microorganism in agricultural applications or bioremediation efforts. In summary, the single-replicon structure of Paenibacillus sp. LK1 and its genomic reference PEII00000000.1 lay the groundwork for further exploration into its biological significance and ecological contributions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. LK1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. LK1 scaffold49, whole genome shotgun sequence.

Gene Summary

Adenine Count

1934121 bp

Thymine Count

1960628 bp

Guanine Count

1612457 bp

Cytosine Count

1656750 bp

Genome Length

7164189 bp

Protein-coding Genes

6233 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter substrate-binding proteinCS562_16805Not AvailablePositive3699677 - 370075040412.8
hypothetical proteinCS562_16810Not AvailableNegative3701108 - 370160818251.5
cation transporterCS562_16815Not AvailableNegative3702013 - 370301435420.8
dioxygenaseCS562_16820Not AvailableNegative3703214 - 370398428424.6
esteraseCS562_16825Not AvailableNegative3703984 - 370465825187.0
voc family proteinCS562_16830Not AvailablePositive3704880 - 370524814193.0
dna-binding proteinCS562_16835Not AvailablePositive3705305 - 370585319930.0
3-ketoacyl-acp reductaseCS562_16840Not AvailableNegative3706073 - 370679225278.4
hypothetical proteinCS562_16845Not AvailableNegative3706874 - 370781533843.7
duf1700 domain-containing proteinCS562_16850Not AvailableNegative3707782 - 370837222290.1

Displaying genes 3401 – 3410 of 6390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.