Paenibacillus sp. LK1

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. LK1 is characterized by possessing a single replicon, indicating a streamlined genomic organization typical of some bacteria within the Paenibacillus genus. This trait may facilitate efficient replication and regulation of genetic material, which can be advantageous for adaptation and survival in various environments. The genome of Paenibacillus sp. LK1 is cataloged under the accession number PEII00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The sequencing of its genome can extend insights into its metabolic capabilities, ecological roles, and potential biotechnological uses, although specific metabolic pathways and ecological functions are not detailed in the provided data. In a broader ecological context, members of the Paenibacillus genus are known for their versatility in diverse habitats, including soil and plant-associated environments. They are often involved in nitrogen fixation and contribute to soil health, nutrient cycling, and plant growth promotion. The traits of Paenibacillus sp. LK1 could suggest a role in these ecological processes, supporting its potential as a beneficial microorganism in agricultural applications or bioremediation efforts. In summary, the single-replicon structure of Paenibacillus sp. LK1 and its genomic reference PEII00000000.1 lay the groundwork for further exploration into its biological significance and ecological contributions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. LK1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. LK1 scaffold49, whole genome shotgun sequence.

Gene Summary

Adenine Count

1934121 bp

Thymine Count

1960628 bp

Guanine Count

1612457 bp

Cytosine Count

1656750 bp

Genome Length

7164189 bp

Protein-coding Genes

6233 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenosine deaminaseCS562_16755Not AvailablePositive3689214 - 369098064944.9
hypothetical proteinCS562_16760Not AvailablePositive3691173 - 369167019094.0
had family hydrolaseCS562_16765Not AvailablePositive3691895 - 369263228207.0
dna starvation/stationary phase protection proteinCS562_16770Not AvailablePositive3692975 - 369345417615.1
nitric oxide synthase oxygenaseCS562_16775Not AvailablePositive3693583 - 369478845311.6
nudix domain-containing proteinCS562_16780Not AvailablePositive3694933 - 369540017568.4
mfs transporterCS562_16785Not AvailableNegative3695438 - 369675146514.0
spermidine/putrescine abc transporter atp-binding proteinCS562_16790Not AvailablePositive3696967 - 369807641945.8
spermidine/putrescine abc transporter permeaseCS562_16795Not AvailablePositive3698066 - 369889931303.3
abc transporter permeaseCS562_16800Not AvailablePositive3698874 - 369968029485.8

Displaying genes 3391 – 3400 of 6390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.