Yersinia bercovieri strain SCPM-O-B-7607

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia bercovieri strain SCPM-O-B-7607 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic metabolism and facultative anaerobic oxygen requirement. This strain is capable of mobility due to the presence of flagella and typically exists as single cells. It thrives optimally at 28°C and is classified as mesophilic, indicating it prefers moderate temperature conditions. The bacterium has a biotic relationship as a free-living organism, with the ability to interact with various hosts, including Homo sapiens. Its cellular structure comprises two membranes and a single replicon, which is indicative of its genetic organization. The adaptability of Y. bercovieri to different habitats suggests a versatile ecological role, potentially allowing it to exploit a range of environmental niches. The ability of Yersinia bercovieri strain SCPM-O-B-7607 to thrive in diverse habitats and its heterotrophic lifestyle highlight its ecological flexibility. This adaptability may contribute to its interactions with human hosts, providing insights into its potential impact on human health and disease ecology. Understanding the traits of this strain can aid in exploring its role within microbial communities and its significance in environmental and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia bercovieri
Strainstrain SCPM-O-B-7607

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia bercovieri strain SCPM-O-B-7607
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia bercovieri strain SCPM-O-B-7607

Gene Summary

Adenine Count

1106748 bp

Thymine Count

1091650 bp

Guanine Count

1040798 bp

Cytosine Count

1079584 bp

Genome Length

4318780 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autoinducer 2 abc transporter permease lsrcCS533_01235Not AvailablePositive290393 - 29147237885.7
autoinducer 2 abc transporter permease lsrdCS533_01240Not AvailablePositive291469 - 29247035165.3
autoinducer 2 abc transporter substrate-binding proteinCS533_01245Not AvailablePositive292539 - 29357337116.5
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolaseCS533_01250Not AvailablePositive293631 - 29450631529.0
(4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomeraseCS533_01255Not AvailablePositive294527 - 29481711064.4
duf2501 family proteinCS533_01260Not AvailablePositive295129 - 29561116545.7
Ncrna_class:otherNot AvailableNot AvailablePositive296261 - 296393Not Available
hnh endonucleaseCS533_01265Not AvailableNegative295653 - 29640828524.2
xre family transcriptional regulatorCS533_01270Not AvailableNegative296498 - 2967258398.24
duf1176 domain-containing proteinCS533_01275Not AvailableNegative297299 - 29839039475.3

Displaying genes 441 – 450 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.