Yersinia bercovieri strain SCPM-O-B-7607

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia bercovieri strain SCPM-O-B-7607 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic metabolism and facultative anaerobic oxygen requirement. This strain is capable of mobility due to the presence of flagella and typically exists as single cells. It thrives optimally at 28°C and is classified as mesophilic, indicating it prefers moderate temperature conditions. The bacterium has a biotic relationship as a free-living organism, with the ability to interact with various hosts, including Homo sapiens. Its cellular structure comprises two membranes and a single replicon, which is indicative of its genetic organization. The adaptability of Y. bercovieri to different habitats suggests a versatile ecological role, potentially allowing it to exploit a range of environmental niches. The ability of Yersinia bercovieri strain SCPM-O-B-7607 to thrive in diverse habitats and its heterotrophic lifestyle highlight its ecological flexibility. This adaptability may contribute to its interactions with human hosts, providing insights into its potential impact on human health and disease ecology. Understanding the traits of this strain can aid in exploring its role within microbial communities and its significance in environmental and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia bercovieri
Strainstrain SCPM-O-B-7607

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia bercovieri strain SCPM-O-B-7607
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia bercovieri strain SCPM-O-B-7607

Gene Summary

Adenine Count

1106748 bp

Thymine Count

1091650 bp

Guanine Count

1040798 bp

Cytosine Count

1079584 bp

Genome Length

4318780 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuoeCS533_18370Not AvailableNegative3969498 - 397001618973.4
nadh-quinone oxidoreductase subunit nuoc/dCS533_18375Not AvailableNegative3970064 - 397186068862.5
nadh-quinone oxidoreductase subunit bCS533_18380Not AvailableNegative3972000 - 397267725612.8
nadh-quinone oxidoreductase subunit nuoaCS533_18385Not AvailableNegative3972696 - 397314516535.4
transcriptional regulator lrhaCS533_18390Not AvailableNegative3973826 - 397475834140.1
pyridoxal phosphate-dependent aminotransferaseCS533_18395Not AvailablePositive3975640 - 397685445458.9
hypothetical proteinCS533_18400Not AvailableNegative3977078 - 39772667050.61
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseCS533_18405Not AvailablePositive3977558 - 397914757202.2
phosphoribosylamine--glycine ligaseCS533_18410Not AvailablePositive3979173 - 398045945309.1
duf1481 domain-containing proteinCS533_18415Not AvailableNegative3980540 - 398119324321.6

Displaying genes 3611 – 3620 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.