Yersinia bercovieri strain SCPM-O-B-7607

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia bercovieri strain SCPM-O-B-7607 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic metabolism and facultative anaerobic oxygen requirement. This strain is capable of mobility due to the presence of flagella and typically exists as single cells. It thrives optimally at 28°C and is classified as mesophilic, indicating it prefers moderate temperature conditions. The bacterium has a biotic relationship as a free-living organism, with the ability to interact with various hosts, including Homo sapiens. Its cellular structure comprises two membranes and a single replicon, which is indicative of its genetic organization. The adaptability of Y. bercovieri to different habitats suggests a versatile ecological role, potentially allowing it to exploit a range of environmental niches. The ability of Yersinia bercovieri strain SCPM-O-B-7607 to thrive in diverse habitats and its heterotrophic lifestyle highlight its ecological flexibility. This adaptability may contribute to its interactions with human hosts, providing insights into its potential impact on human health and disease ecology. Understanding the traits of this strain can aid in exploring its role within microbial communities and its significance in environmental and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia bercovieri
Strainstrain SCPM-O-B-7607

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia bercovieri strain SCPM-O-B-7607
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia bercovieri strain SCPM-O-B-7607

Gene Summary

Adenine Count

1106748 bp

Thymine Count

1091650 bp

Guanine Count

1040798 bp

Cytosine Count

1079584 bp

Genome Length

4318780 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssgCS533_18220Not AvailablePositive3932622 - 393368340544.6
type vi secretion system atpase tsshCS533_18225Not AvailablePositive3933812 - 393647298582.5
membrane-associated zn-dependent protease 1CS533_18230Not AvailableNegative3936549 - 393691212478.9
o-succinylbenzoate--coa ligaseCS533_18235Not AvailableNegative3936913 - 393827248875.6
o-succinylbenzoate synthaseCS533_18240Not AvailableNegative3938260 - 393923135449.8
1,4-dihydroxy-2-naphthoyl-coa synthaseCS533_18245Not AvailableNegative3939231 - 394008831573.7
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseCS533_18250Not AvailableNegative3940102 - 394090829648.2
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseCS533_18255Not AvailableNegative3940905 - 394257861083.1
isochorismate synthase menfCS533_18260Not AvailableNegative3942795 - 394417751787.8
protein rhiaCS533_18265Not AvailableNegative3944489 - 394513923379.4

Displaying genes 3581 – 3590 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.