Yersinia bercovieri strain SCPM-O-B-7607

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia bercovieri strain SCPM-O-B-7607 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic metabolism and facultative anaerobic oxygen requirement. This strain is capable of mobility due to the presence of flagella and typically exists as single cells. It thrives optimally at 28°C and is classified as mesophilic, indicating it prefers moderate temperature conditions. The bacterium has a biotic relationship as a free-living organism, with the ability to interact with various hosts, including Homo sapiens. Its cellular structure comprises two membranes and a single replicon, which is indicative of its genetic organization. The adaptability of Y. bercovieri to different habitats suggests a versatile ecological role, potentially allowing it to exploit a range of environmental niches. The ability of Yersinia bercovieri strain SCPM-O-B-7607 to thrive in diverse habitats and its heterotrophic lifestyle highlight its ecological flexibility. This adaptability may contribute to its interactions with human hosts, providing insights into its potential impact on human health and disease ecology. Understanding the traits of this strain can aid in exploring its role within microbial communities and its significance in environmental and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia bercovieri
Strainstrain SCPM-O-B-7607

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia bercovieri strain SCPM-O-B-7607
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia bercovieri strain SCPM-O-B-7607

Gene Summary

Adenine Count

1106748 bp

Thymine Count

1091650 bp

Guanine Count

1040798 bp

Cytosine Count

1079584 bp

Genome Length

4318780 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dimethylallyltransferaseCS533_17490Not AvailableNegative3772289 - 377323034943.9
dna mismatch repair endonuclease mutlCS533_17495Not AvailableNegative3773223 - 377512470308.5
n-acetylmuramoyl-l-alanine amidase amibCS533_17500Not AvailableNegative3775140 - 377695164434.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCS533_17505Not AvailableNegative3777031 - 377750117059.4
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseCS533_17510Not AvailableNegative3777512 - 377902653081.4
trna epoxyqueuosine(34) reductase quegCS533_17515Not AvailablePositive3779025 - 378017343403.8
Trna-glyNot AvailableNot AvailablePositive3780519 - 3780594Not Available
Trna-glyNot AvailableNot AvailablePositive3780677 - 3780752Not Available
Trna-glyNot AvailableNot AvailablePositive3780821 - 3780896Not Available
oligoribonucleaseCS533_17535Not AvailableNegative3781078 - 378162320902.8

Displaying genes 3441 – 3450 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.