Yersinia bercovieri strain SCPM-O-B-7607

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia bercovieri strain SCPM-O-B-7607 is a Gram-negative, rod-shaped bacterium characterized by its heterotrophic metabolism and facultative anaerobic oxygen requirement. This strain is capable of mobility due to the presence of flagella and typically exists as single cells. It thrives optimally at 28°C and is classified as mesophilic, indicating it prefers moderate temperature conditions. The bacterium has a biotic relationship as a free-living organism, with the ability to interact with various hosts, including Homo sapiens. Its cellular structure comprises two membranes and a single replicon, which is indicative of its genetic organization. The adaptability of Y. bercovieri to different habitats suggests a versatile ecological role, potentially allowing it to exploit a range of environmental niches. The ability of Yersinia bercovieri strain SCPM-O-B-7607 to thrive in diverse habitats and its heterotrophic lifestyle highlight its ecological flexibility. This adaptability may contribute to its interactions with human hosts, providing insights into its potential impact on human health and disease ecology. Understanding the traits of this strain can aid in exploring its role within microbial communities and its significance in environmental and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia bercovieri
Strainstrain SCPM-O-B-7607

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia bercovieri strain SCPM-O-B-7607
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia bercovieri strain SCPM-O-B-7607

Gene Summary

Adenine Count

1106748 bp

Thymine Count

1091650 bp

Guanine Count

1040798 bp

Cytosine Count

1079584 bp

Genome Length

4318780 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secfCS533_10190Not AvailablePositive2240230 - 224119835181.4
mfs transporter permeaseCS533_10195Not AvailablePositive2242085 - 224399271168.2
transcriptional regulator nrdrCS533_10200Not AvailablePositive2244081 - 224453017191.7
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductaseCS533_10205Not AvailablePositive2244610 - 224571940424.9
6,7-dimethyl-8-ribityllumazine synthaseCS533_10210Not AvailablePositive2245854 - 224632416193.5
transcription antitermination factor nusbCS533_10215Not AvailablePositive2246350 - 224676615458.7
thiamine-phosphate kinaseCS533_10220Not AvailablePositive2246836 - 224782535660.1
phosphatidylglycerophosphatase aCS533_10225Not AvailablePositive2247818 - 224829417893.2
1-deoxy-d-xylulose-5-phosphate synthaseCS533_10230Not AvailableNegative2248365 - 225022467605.6
(2e,6e)-farnesyl diphosphate synthaseCS533_10235Not AvailableNegative2250352 - 225127232539.0

Displaying genes 2081 – 2090 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.